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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5550955_5551990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5550955 - 5551990

Intron Length:

1036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

CCTTCTCCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TCCTTCTCCATC

Flanking Amino Acid:

RAEIVAKYDRGRDGAQIEPW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

71.3

34.5

Major BPS

78.2

0.7

77.9

32.1

Major PPT

75.5

0.57

0.8

74.3

29.3

Minor 5ss

33.3

-1.9

3.2

36.5

41.7

Minor BPS

47.2

-0.2

1.9

57.18

42.5

Associated Gene:

Gene:

USP6NL

Ensembl Gene ID:

ENSAPLG00000010144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046482

5520405 - 5553060

32656

ENSAPLT00000010615

5493085 - 5604212

111128

ENSAPLT00000046862

5493085 - 5559299

66215