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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5552065_5604122_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5552065 - 5604122

Intron Length:

52058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

TAATCCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTTATCTTAATC

Flanking Amino Acid:

MSADAEQDAAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

67.8

39.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

75.2

0.57

0.9

68.9

36.5

Minor 5ss

30.9

-2.2

2.6

29.8

36.6

Minor BPS

72.4

0.68

1.2

75.56

34.6

Associated Gene:

Gene:

USP6NL

Ensembl Gene ID:

ENSAPLG00000010144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010615

5493085 - 5604212

111128