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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55538382_55540518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55538382 - 55540518

Intron Length:

2137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTCGTTCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TCTCGTTCCACC

Flanking Amino Acid:

ESSYFRHILPGILSYLADRP

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

70.1

0.45

0.9

62.7

38.5

Minor 5ss

34.5

-1.8

3.3

46.4

44.2

Minor BPS

42.4

-0.6

2.2

55.34

43.3

Associated Gene:

Gene:

PRDM4

Ensembl Gene ID:

ENSAPLG00000009846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010268

55536382 - 55551057

14676