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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55541314_55543943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55541314 - 55543943

Intron Length:

2630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

CCTCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GCTGTTTCATCC

Flanking Amino Acid:

KENMATLFTIWCTLCDKAYP

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

59.1

39.9

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

79.5

0.66

0.7

73.1

25.1

Minor 5ss

30.5

-2.2

3.2

42.5

44.2

Minor BPS

43.9

-0.4

1.8

50.06

41.1

Associated Gene:

Gene:

PRDM4

Ensembl Gene ID:

ENSAPLG00000009846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010268

55536382 - 55551057

14676