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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55546257_55546947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55546257 - 55546947

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTGCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTCTTCATAACT

Flanking Amino Acid:

CNWMMFVRKARNREEQNLVA

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

78.4

0.64

0.9

73.3

37.2

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

72.6

0.79

1.6

88.42

36.6

Associated Gene:

Gene:

PRDM4

Ensembl Gene ID:

ENSAPLG00000009846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010268

55536382 - 55551057

14676