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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55547076_55547328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55547076 - 55547328

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

GCCTCCCTAAAA

Flanking Amino Acid:

YYSRDYARQLGVPEHPDVHI

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

69.9

42.1

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

64.3

0.32

1.1

63.8

37.3

Minor 5ss

32.1

-2

3.1

40.5

45.5

Minor BPS

53.3

0.1

1.8

62.18

43.5

Associated Gene:

Gene:

PRDM4

Ensembl Gene ID:

ENSAPLG00000009846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010268

55536382 - 55551057

14676