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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55554954_55555848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55554954 - 55555848

Intron Length:

895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTAATCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ACTTTCTTAATC

Flanking Amino Acid:

TLKAHEEEVSGLQLSSQVKG

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

79.2

0.66

0.9

69.6

41.2

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

76.3

0.8

1.1

75.93

34.7

Associated Gene:

Gene:

PWP1

Ensembl Gene ID:

ENSAPLG00000009587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009993

55552606 - 55568159

15554