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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55558825_55559466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55558825 - 55559466

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATGA

Flanking Amino Acid:

AASLTLHTDKVQTLQFHPFE

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.5

35.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

72.6

0.51

0.9

65.6

40.2

Minor 5ss

43.5

-0.7

2.6

60.2

44.3

Minor BPS

64.4

0.45

1.9

78.76

38.3

Associated Gene:

Gene:

PWP1

Ensembl Gene ID:

ENSAPLG00000009587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009993

55552606 - 55568159

15554