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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55563111_55563797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55563111 - 55563797

Intron Length:

687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATAACTAAAA

Flanking Amino Acid:

NFDPNPDESPGNYVAVGNMT

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

29.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.9

0.76

0.8

81.4

30.6

Minor 5ss

32.3

-2

3.3

42.9

44.7

Minor BPS

46.4

-0.2

2.1

65.38

39.7

Associated Gene:

Gene:

PWP1

Ensembl Gene ID:

ENSAPLG00000009587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009993

55552606 - 55568159

15554