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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55563909_55564471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55563909 - 55564471

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

AATTCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATATCTCTAATT

Flanking Amino Acid:

DKDYCSLEVHVYNHEEDSFY

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

80.6

31.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

82.6

0.73

0.9

73.8

40.7

Minor 5ss

37.1

-1.5

2.7

44.2

37.1

Minor BPS

64.7

0.54

1.6

80.01

35.8

Associated Gene:

Gene:

PWP1

Ensembl Gene ID:

ENSAPLG00000009587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009993

55552606 - 55568159

15554