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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55595352_55606899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55595352 - 55606899

Intron Length:

11548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTGCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

CTGTTTGTATTT

Flanking Amino Acid:

LMFEILKASKNEVISQQLSV

Intron Amino Acid Position:

836

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.9

32.9

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

79.1

0.66

0.8

80.4

31.6

Minor 5ss

35.9

-1.6

3.3

46.4

48.9

Minor BPS

44.6

-0.3

2.1

61.91

43.6

Associated Gene:

Gene:

BTBD11

Ensembl Gene ID:

ENSAPLG00000009119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009517

55584992 - 55747155

162164