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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55611005_55612111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55611005 - 55612111

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTATTG

5'SS Class:

major

3'SS Sequence:

ATTTTCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

GTTGCTCTAAAT

Flanking Amino Acid:

VLHGHIPVVQLLLDAGAKVE

Intron Amino Acid Position:

626

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

85.2

0.79

0.7

78.2

35.7

Minor 5ss

47.7

-0.2

2.8

64.9

46.4

Minor BPS

53.2

0.18

1.9

74.72

41.8

Associated Gene:

Gene:

BTBD11

Ensembl Gene ID:

ENSAPLG00000009119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036667

55584992 - 55747155

162164

ENSAPLT00000009517

55584992 - 55747155

162164