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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55615577_55618812_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

55615577 - 55618812

Intron Length:

3236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAGA

5'SS Class:

major

3'SS Sequence:

AAAAAATGACTAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGTTTTTTAACT

Flanking Amino Acid:

PDGINSMSEQGMTPLMYACV

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.7

40.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

46.2

-0.2

1.1

30.7

40.4

Minor 5ss

38.4

-1.3

2.9

49.8

Minor BPS

1.11

92.13

30.1

Associated Gene:

Gene:

BTBD11

Ensembl Gene ID:

ENSAPLG00000009119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036667

55584992 - 55747155

162164

ENSAPLT00000009517

55584992 - 55747155

162164