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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55618979_55631764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55618979 - 55631764

Intron Length:

12786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CTCGTGTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TGTCCTCTGAGG

Flanking Amino Acid:

PGVDCEPRQLKIDDCFCASR

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

74.4

Major BPS

72.5

0.56

1.1

63.4

Major PPT

73.7

0.53

0.9

67.1

38.1

Minor 5ss

36.2

-1.6

2.9

37.7

Minor BPS

45.2

-0.5

53.56

41.4

Associated Gene:

Gene:

BTBD11

Ensembl Gene ID:

ENSAPLG00000009119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036667

55584992 - 55747155

162164

ENSAPLT00000009517

55584992 - 55747155

162164