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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55642566_55654713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55642566 - 55654713

Intron Length:

12148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TCTTGCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTCACCCAAATC

Flanking Amino Acid:

ATRVGSIAELSDLVSRAMHH

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

85.2

0.79

0.8

76.7

37.4

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

45.5

-0.3

55.19

43.4

Associated Gene:

Gene:

BTBD11

Ensembl Gene ID:

ENSAPLG00000009119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036667

55584992 - 55747155

162164

ENSAPLT00000009517

55584992 - 55747155

162164