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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55798924_55800927_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

55798924 - 55800927

Intron Length:

2004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

AAGTGCTTAAGA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.9

32.8

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

36.3

-1.6

41.5

Minor BPS

51.9

0.06

2.1

62.68

43.5

Associated Gene:

Gene:

CRY1

Ensembl Gene ID:

ENSAPLG00000008378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030407

55797264 - 55815847

18584