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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55802445_55804279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55802445 - 55804279

Intron Length:

1835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CCTGCCTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CCAAATTTAATT

Flanking Amino Acid:

ESVSGCGSTGGAQLGTGDSQ

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.3

74.1

38.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

62.9

0.29

0.9

55.4

35.1

Minor 5ss

28.9

-2.4

2.6

32.6

Minor BPS

0.11

1.6

61.98

42.4

Associated Gene:

Gene:

CRY1

Ensembl Gene ID:

ENSAPLG00000008378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008754

55800928 - 55815847

14920

ENSAPLT00000047778

55798856 - 55815847

16992

ENSAPLT00000030407

55797264 - 55815847

18584