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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55804382_55805131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55804382 - 55805131

Intron Length:

750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGGCTA

5'SS Class:

major

3'SS Sequence:

TTTCATTACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTCTTTAAAT

Flanking Amino Acid:

YQQLSRYRGLGLLATVPSNP

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

62.3

43.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

0.9

74.1

35.3

Minor 5ss

-1.1

3.3

47.2

48.2

Minor BPS

78.5

0.97

1.3

89.08

35.6

Associated Gene:

Gene:

CRY1

Ensembl Gene ID:

ENSAPLG00000008378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008754

55800928 - 55815847

14920

ENSAPLT00000047778

55798856 - 55815847

16992

ENSAPLT00000030407

55797264 - 55815847

18584