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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55808235_55808334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55808235 - 55808334

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGATCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCCTTTTAATG

Flanking Amino Acid:

YFKLTDLYKKVKKNSSPPLS

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

83.3

29.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.4

0.53

0.9

66.1

39.9

Minor 5ss

2.8

73.4

43.4

Minor BPS

63.5

0.29

1.3

63.63

39.2

Associated Gene:

Gene:

CRY1

Ensembl Gene ID:

ENSAPLG00000008378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047778

55798856 - 55815847

16992

ENSAPLT00000030407

55797264 - 55815847

18584

ENSAPLT00000008754

55800928 - 55815847

14920