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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55809161_55810476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55809161 - 55810476

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

KYGVPSLEELGFDTDGLPSA

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

CRY1

Ensembl Gene ID:

ENSAPLG00000008378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047778

55798856 - 55815847

16992

ENSAPLT00000030407

55797264 - 55815847

18584

ENSAPLT00000008754

55800928 - 55815847

14920