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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55812058_55815598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55812058 - 55815598

Intron Length:

3541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ACTTATTTATTT

Flanking Amino Acid:

PADVFPRLFKEWNIAKLSIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

78.6

35.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

41.6

-0.9

3.6

64.1

47.4

Minor BPS

53.6

0.19

1.7

70.74

40.9

Associated Gene:

Gene:

CRY1

Ensembl Gene ID:

ENSAPLG00000008378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030407

55797264 - 55815847

18584

ENSAPLT00000008754

55800928 - 55815847

14920

ENSAPLT00000047778

55798856 - 55815847

16992