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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55861543_55862592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

55861543 - 55862592

Intron Length:

1050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GACACACCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACACAC

U12 Branch Point Sequence:

TTTGTGGGGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

78.6

Major BPS

46.9

-0.1

1.1

52.6

34.2

Major PPT

62.2

0.27

55.6

39.9

Minor 5ss

29.8

-2.3

37.3

41.2

Minor BPS

38.5

-0.9

2.6

57.85

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040586

55853156 - 55862657

9502