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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55946349_55952712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55946349 - 55952712

Intron Length:

6364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TAATGAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAATT

Flanking Amino Acid:

IPVYPHREEHGYTGSYNYGS

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

72.3

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.9

0.34

60.6

44.4

Minor 5ss

34.1

-1.8

2.9

36.4

40.6

Minor BPS

0.36

1.9

83.59

36.8

Associated Gene:

Gene:

RFX4

Ensembl Gene ID:

ENSAPLG00000005849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006052

55929992 - 55980414

50423