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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56010902_56013178_R

Intron Information:

Intron Rank:

135723

Intron Class:

major

Intron Phase:

Intron Coordinates:

56010902 - 56013178

Intron Length:

2277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTGGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TCTTCCTTTGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

68.8

0.47

1.2

63.4

Major PPT

66.8

0.38

1.7

76.3

37.7

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

46.1

-0.2

3.6

79.54

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034666

56010348 - 56025358

15011