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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56039526_56050134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56039526 - 56050134

Intron Length:

10609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATTAT

U12 Branch Point Sequence:

TATGCACAAACT

Flanking Amino Acid:

RARGPRAVLTRCHYCKSSCH

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

77.5

33.3

Major BPS

64.6

0.36

1.1

55.7

39.9

Major PPT

80.7

0.69

0.8

76.8

Minor 5ss

46.4

-0.4

3.1

63.9

47.7

Minor BPS

45.9

-0.2

2.3

71.21

45.1

Associated Gene:

Gene:

POLR3B

Ensembl Gene ID:

ENSAPLG00000005305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044733

56039396 - 56111370

71975