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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56044335_56050134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56044335 - 56050134

Intron Length:

5800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGTTTTTCAAAT

Flanking Amino Acid:

RARGPRAVLTRQPTEGRSRD

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

77.5

33.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

73.6

0.53

74.8

33.2

Minor 5ss

46.4

-0.4

3.1

63.9

47.7

Minor BPS

60.2

0.4

1.6

77.94

38.2

Associated Gene:

Gene:

POLR3B

Ensembl Gene ID:

ENSAPLG00000005305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037582

56041865 - 56111370

69506

ENSAPLT00000033758

56039396 - 56111370

71975

ENSAPLT00000005527

56038943 - 56111370

72428