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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56062811_56064044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56062811 - 56064044

Intron Length:

1234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTATGTTGC

5'SS Class:

major

3'SS Sequence:

CTTTTTTCGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAA

U12 Branch Point Sequence:

AAATGTAAAACT

Flanking Amino Acid:

QQPQYKDVPVTYKGATDSYI

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.3

65.8

41.1

Major BPS

0.4

1.1

66.5

36.3

Major PPT

79.3

0.66

0.9

81.3

30.8

Minor 5ss

-0.2

2.4

59.9

38.5

Minor BPS

43.1

-0.4

2.2

61.21

42.4

Associated Gene:

Gene:

POLR3B

Ensembl Gene ID:

ENSAPLG00000005305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037582

56041865 - 56111370

69506

ENSAPLT00000033758

56039396 - 56111370

71975

ENSAPLT00000005527

56038943 - 56111370

72428

ENSAPLT00000044733

56039396 - 56111370

71975