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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56089380_56092012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56089380 - 56092012

Intron Length:

2633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTAATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTCCTCATTT

Flanking Amino Acid:

GNKRLELAGQLALYG*

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

76.5

0.6

38.7

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

61.3

0.43

1.8

80.1

42.3

Associated Gene:

Gene:

POLR3B

Ensembl Gene ID:

ENSAPLG00000005305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033064

56089258 - 56111370

22113