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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56093494_56095028_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56093494 - 56095028

Intron Length:

1535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCGTTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTGATATTAACT

Flanking Amino Acid:

QKAQIFTQMQALKYIGNKVR

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

38.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

71.2

0.48

67.1

38.1

Minor 5ss

33.6

-1.9

3.3

49.6

46.6

Minor BPS

58.5

0.34

1.7

73.32

43.4

Associated Gene:

Gene:

POLR3B

Ensembl Gene ID:

ENSAPLG00000005305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005527

56038943 - 56111370

72428

ENSAPLT00000044733

56039396 - 56111370

71975

ENSAPLT00000037582

56041865 - 56111370

69506

ENSAPLT00000033758

56039396 - 56111370

71975

ENSAPLT00000033064

56089258 - 56111370

22113