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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56095152_56102290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56095152 - 56102290

Intron Length:

7139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACAA

5'SS Class:

major

3'SS Sequence:

CTTCTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAA

U12 Branch Point Sequence:

TTTCTGTCTATT

Flanking Amino Acid:

EDIPIAIIFKAMGVESDQEI

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

67.8

39.3

Major BPS

57.2

0.18

1.1

58.3

34.3

Major PPT

82.3

0.73

0.7

76.4

32.2

Minor 5ss

36.8

-1.5

3.1

47.7

Minor BPS

43.3

-0.4

2.4

69.06

Associated Gene:

Gene:

POLR3B

Ensembl Gene ID:

ENSAPLG00000005305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033758

56039396 - 56111370

71975

ENSAPLT00000033064

56089258 - 56111370

22113

ENSAPLT00000005527

56038943 - 56111370

72428

ENSAPLT00000044733

56039396 - 56111370

71975

ENSAPLT00000037582

56041865 - 56111370

69506