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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56132018_56133401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56132018 - 56133401

Intron Length:

1384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TATTCCTAAACT

Flanking Amino Acid:

QWDYHKTIPETLITDEVRLQ

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

72.7

0.57

72.1

31.1

Major PPT

0.56

0.9

66.1

40.8

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

79.6

1.01

1.6

93.36

34.7

Associated Gene:

Gene:

TCP11L2

Ensembl Gene ID:

ENSAPLG00000002388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046519

56128506 - 56140879

12374

ENSAPLT00000021411

56128506 - 56143075

14570

ENSAPLT00000002441

56128506 - 56140879

12374