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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56133590_56134619_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56133590 - 56134619

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTATC

5'SS Class:

major

3'SS Sequence:

TTGCAATGCATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATCTGCTGATTT

Flanking Amino Acid:

KFQEILEETPSALDLTTEWI

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

35.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

59.8

0.22

54.1

40.3

Minor 5ss

40.6

-1

3.1

54.1

37.3

Minor BPS

46.9

-0.1

2.1

66.83

44.3

Associated Gene:

Gene:

TCP11L2

Ensembl Gene ID:

ENSAPLG00000002388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002441

56128506 - 56140879

12374

ENSAPLT00000046519

56128506 - 56140879

12374

ENSAPLT00000021411

56128506 - 56143075

14570