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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56140065_56140748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

56140065 - 56140748

Intron Length:

684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCAATTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TCTCAATTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

1.1

85.2

Major BPS

80.4

0.76

80.3

31.8

Major PPT

71.6

0.49

38.4

Minor 5ss

38.2

-1.3

2.8

46.3

Minor BPS

58.4

0.26

1.8

71.45

Associated Gene:

Gene:

TCP11L2

Ensembl Gene ID:

ENSAPLG00000002388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046519

56128506 - 56140879

12374