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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56175520_56198691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56175520 - 56198691

Intron Length:

23172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTGAATTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

ATTTCCTGAATT

Flanking Amino Acid:

RAIERFSGRVVAIKSIRKDK

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

68.9

0.42

0.9

61.3

38.9

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

79.7

1.01

1.2

91.67

30.7

Associated Gene:

Gene:

NUAK1

Ensembl Gene ID:

ENSAPLG00000017168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024025

56175202 - 56226106

50905