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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56432731_56436373_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56432731 - 56436373

Intron Length:

3643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGGTTCAT

5'SS Class:

weak_major

3'SS Sequence:

TGTTCCAATTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

ATGACATTGATG

Flanking Amino Acid:

REHGSSTLLSFNFFFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.1

51.8

40.8

Major BPS

76.2

0.65

39.8

Major PPT

0.29

1.1

66.1

Minor 5ss

31.3

-2.1

3.3

45.8

43.5

Minor BPS

49.1

-0.2

1.7

54.58

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020179

56432558 - 56436392

3835