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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56474073_56478071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

56474073 - 56478071

Intron Length:

3999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTCTATTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.1

65.7

45.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

84.8

0.78

0.8

80.6

31.4

Minor 5ss

-1.6

45.9

42.3

Minor BPS

66.7

0.52

1.5

77.76

32.3

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347