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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56478716_56482020_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56478716 - 56482020

Intron Length:

3305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATTTCTCTATTC

Flanking Amino Acid:

LHYFSKVVDELNILHSELAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

76.9

34.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

81.7

0.71

0.8

80.7

31.3

Minor 5ss

39.6

-1.2

2.8

50.5

45.7

Minor BPS

0.07

1.9

69.19

36.6

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347

ENSAPLT00000015786

56463571 - 56499661

36091