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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56482109_56484281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56482109 - 56484281

Intron Length:

2173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTTACTTTGAAT

Flanking Amino Acid:

IIQFREKDLTEVSTLKDLFG

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

0.82

0.8

83.9

25.3

Major PPT

90.9

0.92

0.6

84.1

30.9

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

68.9

0.68

1.4

85.09

34.9

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347

ENSAPLT00000015786

56463571 - 56499661

36091