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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56484502_56485482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56484502 - 56485482

Intron Length:

981

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAC

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTATCAATT

Flanking Amino Acid:

RLPKRKENEKLKAEVAKEVA

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.4

34.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.2

0.59

0.9

75.1

39.1

Minor 5ss

31.9

-2.1

3.2

42.1

Minor BPS

49.8

0.07

1.8

68.48

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347

ENSAPLT00000015786

56463571 - 56499661

36091