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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56488104_56492096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56488104 - 56492096

Intron Length:

3993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCACAA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

GGGCTTTGGATT

Flanking Amino Acid:

FLSSVSDMVQSIQGELDAEA

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

1.2

58.7

42.2

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

35.4

-1.7

3.4

47.2

48.2

Minor BPS

45.1

-0.3

1.3

53.66

35.6

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347

ENSAPLT00000015786

56463571 - 56499661

36091