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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56493959_56494036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56493959 - 56494036

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAG

U12 Branch Point Sequence:

TGAGCTTGAAGA

Flanking Amino Acid:

QAESKKEYEEWICAINNISR

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

55.8

0.15

1.5

55.1

42.1

Major PPT

82.2

0.73

0.8

74.3

36.5

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

47.8

-0.1

1.8

57.59

41.8

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347

ENSAPLT00000015786

56463571 - 56499661

36091