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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56494094_56494209_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56494094 - 56494209

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGAGCT

5'SS Class:

major

3'SS Sequence:

TTTGTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

ACAAATGTAAAA

Flanking Amino Acid:

RQIYLTDNPEAAAIKLNQTA

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

68.6

36.5

Major BPS

69.5

0.48

73.5

28.6

Major PPT

0.74

0.8

77.1

37.1

Minor 5ss

26.2

-2.7

3.5

38.7

46.6

Minor BPS

39.9

-0.7

45.49

36.9

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347

ENSAPLT00000015786

56463571 - 56499661

36091