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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56496110_56496213_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56496110 - 56496213

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTCTTATTT

Flanking Amino Acid:

TEFLDQNRGGRRANPFGESE

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.4

0.77

0.8

79.4

32.3

Minor 5ss

43.1

-0.8

56.5

47.9

Minor BPS

0.7

1.5

84.24

36.8

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347

ENSAPLT00000015786

56463571 - 56499661

36091