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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56496267_56497104_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56496267 - 56497104

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TGCCTTTTATCT

Flanking Amino Acid:

SEDSSKNEEEDSLLQQMFVV

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

89.4

0.89

0.7

81.5

35.9

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

54.2

0.21

1.6

69.28

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347

ENSAPLT00000015786

56463571 - 56499661

36091