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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56498990_56499532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56498990 - 56499532

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

LGKEITEAQKDPEALAQLMK

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.6

0.91

0.7

89.2

27.2

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

APPL2

Ensembl Gene ID:

ENSAPLG00000015124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028995

56473315 - 56499661

26347

ENSAPLT00000015786

56463571 - 56499661

36091