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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56505860_56506835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56505860 - 56506835

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGCAT

5'SS Class:

major

3'SS Sequence:

TCTTTTTACTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATCTTTTTACTT

Flanking Amino Acid:

THKRLEVCLQEFELLYFSLS

Intron Amino Acid Position:

1119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

64.6

40.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.3

0.68

0.8

81.3

29.6

Minor 5ss

37.9

-1.4

3.4

55.3

48.9

Minor BPS

58.8

0.35

1.6

72.81

39.3

Associated Gene:

Gene:

WASHC4

Ensembl Gene ID:

ENSAPLG00000015019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015671

56502852 - 56543301

40450