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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56512382_56515555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56512382 - 56515555

Intron Length:

3174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

ACTTTCTTGATT

Flanking Amino Acid:

THGTGIMNTTVNFTYQFLRK

Intron Amino Acid Position:

839

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

77.2

32.8

Major BPS

83.8

0.84

73.6

41.8

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

36.1

-1.6

2.9

47.9

41.8

Minor BPS

72.4

0.79

1.1

80.3

35.9

Associated Gene:

Gene:

WASHC4

Ensembl Gene ID:

ENSAPLG00000015019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015671

56502852 - 56543301

40450