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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56520322_56521322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56520322 - 56521322

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

CTTTGTCTAATT

Flanking Amino Acid:

KLDLISELTERVRAQCDCCF

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

70.9

39.9

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

78.2

0.63

0.9

70.3

Minor 5ss

33.5

-1.9

3.2

44.4

43.5

Minor BPS

52.2

0.15

2.1

75.83

41.7

Associated Gene:

Gene:

WASHC4

Ensembl Gene ID:

ENSAPLG00000015019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015671

56502852 - 56543301

40450