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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56521684_56523543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56521684 - 56523543

Intron Length:

1860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCATCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTTCTGAACT

Flanking Amino Acid:

QALHSISVAKKRVISDKKYS

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

82.1

0.8

71.6

36.4

Major PPT

66.4

0.37

1.1

64.6

40.9

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

82.4

1.1

1.2

96.74

27.7

Associated Gene:

Gene:

WASHC4

Ensembl Gene ID:

ENSAPLG00000015019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015671

56502852 - 56543301

40450