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Intron Name: Anas_platyrhynchos_platyrhynchos_1_56523652_56524211_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56523652 - 56524211

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GCATTGACTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTACAT

U12 Branch Point Sequence:

ACTACATCAACT

Flanking Amino Acid:

ALCRLVELLKAIEHMFYRRS

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

72.3

39.5

Major BPS

61.4

0.28

1.1

36.5

Major PPT

56.3

0.14

1.1

57.6

42.2

Minor 5ss

33.1

-1.9

3.2

43.3

44.4

Minor BPS

53.8

0.2

1.9

73.14

43.1

Associated Gene:

Gene:

WASHC4

Ensembl Gene ID:

ENSAPLG00000015019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015671

56502852 - 56543301

40450